CDS

Accession Number TCMCG042C49276
gbkey CDS
Protein Id XP_016481412.1
Location complement(join(17335..17508,17996..18118,18196..18310,19271..19369,19451..19503,19765..19921,20042..20100,20231..20298,20382..20525,21861..21924,22863..22913,22993..23132,23211..23350,23696..24002,24094..24166,25276..25411,25617..25663,26431..26476,27248..27360,27447..27482,27580..27783,29773..29838))
Gene LOC107802422
GeneID 107802422
Organism Nicotiana tabacum

Protein

Length 804aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016625926.1
Definition PREDICTED: DNA mismatch repair protein MSH4 isoform X2 [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category L
Description MutS family domain IV
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08740        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGAAGACGACACCGGAGAACGATCAAGCTTCGTCATCGGCCTCATCGAGAATCGCGCCAAGGAGGTTGGAGTAGCTGCATTTGACTTGAGATCAGCTTCACTGCATCTTTCTCAGTATATAGAGACTAGCAGCTCCTATCAAAATACAAAGACTTTACTACAGTTCTATGAACCTATGGCGATCATTGTTCCCCCAAATAAATTGGCAGCAGATGGAATGGTTGGAGTCTCACAGCTAGCTGATGGATTTTGTTCCTCCACAAGAAAGGTTATAATGAATCGTGGTTGCTTTGATGATACCAGGGGAGCTGTACTGGTTAAAGGATTAGCTGCTAAGGAACCGTCTGCTCTTGGTTTGGACTCATACTACAAGCAATATTATTTGTGTCTGGCTGCAGCAGCGGCAACTATCAAGTGGATTGAAGCTGAGAAAGGTGTTGTTGTGATAAATCACTCTTTACTGGTTACCTTCAATGGATCTTTTGACCACATGAACATTGATGCCACCAGTGTTCAGAACTTGGAGATAATTGAGCCTATGCACTCTTCTCTTTTGGGCACAAACAGCAAAAAGAGAAGTTTATTCCACATGCTTAAAACAACTCGAACTATTGGCGGGTATGGAAATAATTGCATTGATAAGCTGGATGAGTTGATGAGCAATGAGCAGCTATTCTTTGGCTTGTCTCAGGCCCTTCGTAAGTTTCCGAAAGAAACAGATAGGGTCCTTTGTCACTTCTGCTTCAAGCCAAAGAGAGTTACTAATGAAGTCTTGGCTTCGAATAATGGAAGGAGGAACCAAATTATGATATCCAGCATTATTCTTCTCAAAACCGCTCTTGATGCTTTACCGTTACTCTCCCAGGTGCAGCATCATTGTTGGGGGCAGGCGTTCACTTTTCTGTATCTTATATGGTACAATGATGAGCTTGTGATTCAGGTGCTTAAAGAAGCCAAGAGTTGTCTGCTTGGAAATGTTTACAAGTCCATATGTGAGAATGAAAAATATACTTCAATCAGGAACAGAATTGGAGAAGTGATTGATGAAGATGTCCTTCATACACGAGTTCCTTTTGTTGCACGGACACAGCAGTGTTTTGCTTTTAAGGCTGGAGTGGATGGGCTTCTTGATATGGCCCGTAGATCATTTTGTGATACCAGCGAAGCTGTACACGACCTCGCAAATAAGTATCGTGAAGATTTCAGACTGCCAAACTTGAAGATCCCATTCAATAACAGGAAAGGGTTTTACTTTAGCATTCCGCAGAAGGACATACAGGGAAAACTGCCGAGCAAGTTCATTCAGGTCATGAAACATGGAAACAATGTACATTGCTCCAGTCTTGAACTTGCTTCATTGAATGCTAGGAACAAGTCTGCAGCTAAAGAGTGCTGGTTGAGGACTGCATTCTGCCTGGAAGCATTAATGGATGCAATACGAGAGGATGTCTCTGTGCTTACCGTTCTTTCAGAAGTGTTGTGCCTTTTAGACATGATGGTGAATTCATTTGCTCACACGATATCAACAAAACCAGTTGATAGATATACTAGACCTAATTTTACATGTGATGGCCCATTGGCAATTGATTCTGGACGGCACCCCATTCTGGAAAGCATAAACAATGAATTCATTCCAAATGGTATCTTTCTTTCTGAAGCATCAAATATGGCTATTGTAATGGGCCCAAACATGAGTGGAAAAAGTACTTATCTTCAGCAAGTTTGTCTAACTGTCATCCTTGCTCAAATTGGTTGCTATATTCCTGCTCGGTTTGCCACTTTGAGAGTGGTCGATCGTATTTTTACAAGGATGGGAACAATGGACTGTCTCGAATCAAACTCTAGCACGTTCATGACAGAGATGAAGGAGACGGCTTTTATAATGCAAAACGTCTCCTCTAGAAGTCTGATCGTTATGGATGAATTGGGGAGGGCGACTTCGTCCTCTGATGGATTTGCAATCGCATGGAGTTGTTGTGAGCAGCTATTGGCACTTAAAGCGTACTCAATATTTGCTACTCATATGGAAAATCTTTCAGAGCTAGCCACCATGTATCCGAATGTGAAAATTCTTCATTTTGATGTTGATGTGAGGAATAACCGCATGGACTTCAAGTTTCTATTGAAGGATGGACTGCGTCACGTGCCACATTACGGCCTTATGTTAGCAGGGGTGGCTGGACTACCAAGTTCAGTAGTAGAAACTGCCAAAAAAATCACATCTAGGATTAAAGAGAAGGAAATGAAGAGAATGGAGGTGAATTACAGACAGTATCAGGACTTACAATTGACTTACCAAGTGGCTCAACGGCTGATGTGCTTGAAATTTTCGGATCAGGATGAAGATTCTTTGAGGGAGGCTCTGCAGGATCTCAAAGAAAGCTACTTAAGTGGTAGGCATAAAGATAATTAG
Protein:  
MEDDTGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYEPMAIIVPPNKLAADGMVGVSQLADGFCSSTRKVIMNRGCFDDTRGAVLVKGLAAKEPSALGLDSYYKQYYLCLAAAAATIKWIEAEKGVVVINHSLLVTFNGSFDHMNIDATSVQNLEIIEPMHSSLLGTNSKKRSLFHMLKTTRTIGGYGNNCIDKLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKPKRVTNEVLASNNGRRNQIMISSIILLKTALDALPLLSQVQHHCWGQAFTFLYLIWYNDELVIQVLKEAKSCLLGNVYKSICENEKYTSIRNRIGEVIDEDVLHTRVPFVARTQQCFAFKAGVDGLLDMARRSFCDTSEAVHDLANKYREDFRLPNLKIPFNNRKGFYFSIPQKDIQGKLPSKFIQVMKHGNNVHCSSLELASLNARNKSAAKECWLRTAFCLEALMDAIREDVSVLTVLSEVLCLLDMMVNSFAHTISTKPVDRYTRPNFTCDGPLAIDSGRHPILESINNEFIPNGIFLSEASNMAIVMGPNMSGKSTYLQQVCLTVILAQIGCYIPARFATLRVVDRIFTRMGTMDCLESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGFAIAWSCCEQLLALKAYSIFATHMENLSELATMYPNVKILHFDVDVRNNRMDFKFLLKDGLRHVPHYGLMLAGVAGLPSSVVETAKKITSRIKEKEMKRMEVNYRQYQDLQLTYQVAQRLMCLKFSDQDEDSLREALQDLKESYLSGRHKDN